Wrangle FASTA and FASTQ with SeqKit
Help 8 / 11
Exercises

Only keep sequence IDs

Using seqkit seq, create the file read_names.txt, which contains the sequencing read names of the file NA12878.fastq. It should only contain the SRR IDs and not the full description.

Exercise Criteria:
0 / 2
  • File read_names.txt exists
  • File read_names.txt contains SRR IDs of each read in NA12878.fastq
Loading...