IGV tutorial
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by Malachi Griffith, Sorana Morrissy, Jim Robinson, Ben Ainscough, Jason Walker, and Obi Griffith

This lab will introduce you to the Integrative Genomics Viewer (IGV), one of the most popular visualization tools for High Throughput Sequencing (HTS) data.

After this lab, you will be able to:

  • Visualize a variety of genomic data
  • Quickly navigate around the genome
  • Visualize read alignments
  • Validate SNP/SNV calls and structural re-arrangements by eye

There are a few thought-provoking Questions or Notes pertaining to sections of the lab. These are optional, and may take more time, but are meant to help you better understand the visualizations you are seeing.