We preloaded data from Maurano et al. into your sandbox. Let’s take a look at what files we now have:
Type in the command line.
Your directory contains 7 BED files and 1 genome file. Three of these files (those starting with f for “fetal tissue”) reflect Dnase I hypersensitivity sites measured in different fetal tissue samples.
In order to have a rough sense of the remaining .bed files, let’s load them into IGV: